Well, by golly, if anybody would know, Gary would!! Myself I have not heard of this issue from anyone on the site, but that does not mean it does not exist! Yes, The connector you mentioned HAS caused issues in the past with lost pickup coil signal. That's the problem with 25+ year old bikes and electrical connectors in general...
The Yamaha TM lists the spec as 110 ohm plus or minus 10% at 68 degrees F. Sorry, I quit working 4 years ago so I don't have easy access to the temperature conversion charts but as you probably already know resistance goes up with temperature. If you measure the resistance at the TCI connector it should give you a relative indication of the condition of the connector you are referring to.
Other than that you would have to use an oscilloscope to dynamically test the output at the TCI. Are you having an issue with your Ignitec unit???