The Hazards over ride the turn signals so if the turn signals are working correctly without the flashers on don't worry about that part of the circuit. Which relay did you replace there are two for the Hazards? I sent up the signal system drawing via e-mail.
If you replaced the main hazard relay (the one with 6 wires) check the dark green wire coming out of the realy to see if you have power there when your emergency flashers are on (depending on the meter you may not read a full twelve volts), if you do and you replaced the relay the contact in the socket is probally bad. If you do have power than you problem is from there to the lights.